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Paketbeschreibung


Paketnamelibbio-samtools-perl
Beschreibungread SAM/BAM nucleotide sequence aligment database files
Archiv/RepositoryOffizielles Ubuntu Archiv lucid (universe)
Version1.09-1
Sektionuniverse/perl
Prioritätoptional
Installierte Größe536 Byte
Hängt ab vonperl (>= 5.10.0-24ubuntu4), perlapi-5.10.0, libc6 (>= 2.7), zlib1g (>= 1:1.2.3.3.dfsg)
Empfohlene Pakete
PaketbetreuerUbuntu Developers
Quelle
Paketgröße189224 Byte
Prüfsumme MD5f0f04bcbae5e05529174287e9d1dc632
Prüfsumme SHA1b8a7c12c293c2b14d8bdf4564f86d93b3262e8da
Prüfsumme SHA25628668c4213b44ca707efbdf10531431377895aa105bb6142598762a86ea8aa0b
Link zum Herunterladenlibbio-samtools-perl_1.09-1_i386.deb
Ausführliche BeschreibungBio::SamTools provides a Perl interface to the libbam library for indexed and unindexed SAM/BAM sequence alignment databases. It provides support for retrieving information on individual alignments, read pairs, and alignment coverage information across large regions. It also provides callback functionality for calling SNPs and performing other base-by-base functions. Most operations are compatible with the BioPerl Bio::SeqFeatureI interface, allowing BAM files to be used as a backend to the GBrowse genome browser application.


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