Paketname | ssake |
Beschreibung | genomics application for assembling millions of very short DNA sequences |
Archiv/Repository | Offizielles Debian Archiv squeeze (main) |
Version | 3.5-1 |
Sektion | science |
Priorität | optional |
Installierte Größe | 188 Byte |
Hängt ab von | perl, python |
Empfohlene Pakete | |
Paketbetreuer | Debian Med Packaging Team |
Quelle | |
Paketgröße | 40382 Byte |
Prüfsumme MD5 | f0cde4a3d50e53740e2eaaa564654430 |
Prüfsumme SHA1 | 64c2506236f1e2cea69a301b15688b959abb0cde |
Prüfsumme SHA256 | dfbc0c1fa499f2e3b378eef3dce38b1cdb4cbe7e9de59254d6dfbdbea8f7e8af |
Link zum Herunterladen | ssake_3.5-1_all.deb |
Ausführliche Beschreibung | The Short Sequence Assembly by K-mer search and 3′ read Extension
(SSAKE) is a genomics application for aggressively assembling
millions of short nucleotide sequences by progressively searching for
perfect 3′-most k-mers using a DNA prefix tree. SSAKE is designed to
help leverage the information from short sequences reads by
stringently clustering them into contigs that can be used to
characterize novel sequencing targets.
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